Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015857516.1_cds_XP_016513446.1_25989
CDS Infomation

[gene=LOC107830416] [db_xref=GeneID:107830416] [protein=serine/threonine-protein phosphatase 6 regulatory subunit 3-like] [protein_id=XP_016513446.1] [location=join(14437..14476,14787..14847,14994..15069,15168..15242,15953..16006,16493..16552,16639..16755,17104..17198,17311..17513,18586..18683,20467..20570,20682..20847,21000..21122,22519..22601,23669..23810,24699..24728,26245..26315,26405..27035)] [gbkey=CDS]
Sequence

ATGGAGTTCCAGGATTTAGCCCAAAGCGAAGATATGCACTATTCAATTTTTTTTTTTNTG
GAAGAGGCTCCAGAAGATGCTGAGAAGAGACGAACTTTTAAGTTTCCGTTTATTGCTTGT
GAAATTTTTACATGCGAGGTGGACATAATTCTCAAAGCTTTGGTTGAGGAGGAGGAGCTA
ATGAACCTGCTATTCTCATTCTTGGAACCTGAGCACGCACATAGTACTTTGTTGGCTGGT
TACTTCAGCAAGGTTGTCATATGTCTGTTGCTGCGGAAGACAACACCATTTATGAACTAT
GTGCATGCTCATCAAGATATTATCAAGAAGTTGGTTGATCTCATTGGAATTACATCCATC
ATGGAGGTTTTAATTCGCCTAATTGGCACTGATGAACATTTGTATAGCAACTTCGCGGAT
TCCATGCAGTGGCTGGAAGATACAGATGTGCTGGAGATGATCGTGGATAAGTTTAGCTCA
TCAGATTGCCCTGAAGTGCATGCTAATGCAGCAGAAACTTTGTGTGCCATTACTCGATAC
GCTCCCCCTGGGATAGCTGCCAAAATCTCCAGCCCAAGTTTCATTGGGAGGTTGTTTCGT
CATGCTCTGGAGGACTCACGACCAAAATCCGTTTTGGTTAACTCATTATCTGTATGCATA
TCGTTGTTAGACCCTAAGAGGCTATCAGCAGGAACATATTACATGTACGGTCGCCAGTCA
ATGCAGTGTTCTAGAGTAAGTGCGAATCCTGAGACTGTGGAAGGGATGTTGGAAAGCTTA
GGTGATTTACTGAAGCTTTTGGATATTACATCGGAGGATAATGTCTTGCCAACAACATAT
GGAAGCTTACGTCCACCTCTTGGGAAGCATCGTCTGAAGATTATAGAGTTTGTTTCAGTC
TTGGTGAGTGTTAGCAGTGAAGTTGCCGAAAAGGAGTTGATCTGTCTTGGTGCTATTAAA
CGCATCCTGGAATTGTTTTTTGAGTATCCATACAACAACTTTTTGCATCATCATGTTGAG
ACAATAATAATATCGTGCTTGGATAGTAAGAATGTTCAATTTGTTGAACATCTTCTTAGT
GACTGTAATCTTGTGGAAAAAATTCTCGAGGCAGAGAAGAACTCAGCGCTTGCTGCTGAT
CCAACCAAGCCAACGGCCTCTGTTGAAGGGAGATCCCCACCCAGGATTGGAAATATTGGG
CATGTGACACGAATAGCTAACAAACTTGTTCAACTAAGGAACAACAATAATGGCATACAG
TCGCGCCTGCAGGAGAACAGTGAATGGATTGATTGGCAGACAAACATCCTTCAAAAACGG
AATGCTGTGGAAAATGTCTTCCAGTGGGCTTGCGGGAGACCCACGTCACTGCATGACCGA
ATGAAGGACAGTGATGACGATGATTATCAAGATAGAGATTATGATGTTGCAGCTCTGGCA
AATAATTTAAGCCAGGCGTTCCGATATGGAATATATAACAATGATGAACTTGATGAGGCT
CGTGGTTCACTTGAACGCGATGATGAGGACGTCTATTTTGATGATGAATCTGCTGAAGTT
GTGATATCTTCACTTCGTTTAGGGGACGATCAGGAAAGTGGATCACTTTTTACAAATTCC
AACTGGTTTGCTTTTGAGGATGACAGAATAGCTAATGATCAGTCTACTGGCTTGGTGACT
TCTCCCTCCCCAAACACTGAAGAGACTGATGTTATTAGGCCCGACATGAATGATGATGCA
GCTGCTGATGAAGATGATGATTTGGCAGACACTGCCACATCTAACCTGCCTGAGCCAAAG
CCAAGTACTGATAATCCTTCACCCAGTAGTTTCACTGAGGACTTGCATCATGCCACAGGC
AATGATGCCAATAAGCCTCCTGAATGGGTTGAATGGCGAGAAAGTTCTGATACAATTAGA
ACGTCCAATCAAACCTCAGATTCACCTGATGTAGCTGATGTGGTTGGGCCTTCTTTACCT
AATGGTGAGGTCAAAGTGGAATCAGAAGCTCAGAAGGACACTGTTCAGTCAAAAGAAGAA
ATGGCAAATATTCCACCCACTAATGGGTCCAGCAGTAATGTGGAAAAACATTCTGAAGGA
TCACCAGGTGATACCTCACAGTCTCCAGAAACAGATGGGAGCCAAATCGCTAGCAATCTT
AACTCTGGTAGCATGGAGAAGCCACCTGCTGGAACCGAGGGATTATCTAGTGGACAAACT
GAGAAGTGA

Peptide Sequence

PEP ID

XP_016513446.1
PEP Infomation

PREDICTED: serine/threonine-protein phosphatase 6 regulatory subunit 3-like [Nicotiana tabacum]
Sequence

MEFQDLAQSEDMHYSIFFFXEEAPEDAEKRRTFKFPFIACEIFTCEVDIILKALVEEEEL
MNLLFSFLEPEHAHSTLLAGYFSKVVICLLLRKTTPFMNYVHAHQDIIKKLVDLIGITSI
MEVLIRLIGTDEHLYSNFADSMQWLEDTDVLEMIVDKFSSSDCPEVHANAAETLCAITRY
APPGIAAKISSPSFIGRLFRHALEDSRPKSVLVNSLSVCISLLDPKRLSAGTYYMYGRQS
MQCSRVSANPETVEGMLESLGDLLKLLDITSEDNVLPTTYGSLRPPLGKHRLKIIEFVSV
LVSVSSEVAEKELICLGAIKRILELFFEYPYNNFLHHHVETIIISCLDSKNVQFVEHLLS
DCNLVEKILEAEKNSALAADPTKPTASVEGRSPPRIGNIGHVTRIANKLVQLRNNNNGIQ
SRLQENSEWIDWQTNILQKRNAVENVFQWACGRPTSLHDRMKDSDDDDYQDRDYDVAALA
NNLSQAFRYGIYNNDELDEARGSLERDDEDVYFDDESAEVVISSLRLGDDQESGSLFTNS
NWFAFEDDRIANDQSTGLVTSPSPNTEETDVIRPDMNDDAAADEDDDLADTATSNLPEPK
PSTDNPSPSSFTEDLHHATGNDANKPPEWVEWRESSDTIRTSNQTSDSPDVADVVGPSLP
NGEVKVESEAQKDTVQSKEEMANIPPTNGSSSNVEKHSEGSPGDTSQSPETDGSQIASNL
NSGSMEKPPAGTEGLSSGQTEK

Transcript Sequence

Gene sequence data has not been registered.